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BMCBI
2010
233views more  BMCBI 2010»
15 years 2 months ago
Odefy -- From discrete to continuous models
Background: Phenomenological information about regulatory interactions is frequently available and can be readily converted to Boolean models. Fully quantitative models, on the ot...
Jan Krumsiek, Sebastian Pölsterl, Dominik M. ...
RECOMB
2005
Springer
16 years 2 months ago
Towards an Integrated Protein-Protein Interaction Network
Abstract. Protein-protein interactions play a major role in most cellular processes. Thus, the challenge of identifying the full repertoire of interacting proteins in the cell is o...
Ariel Jaimovich, Gal Elidan, Hanah Margalit, Nir F...
KDD
2005
ACM
127views Data Mining» more  KDD 2005»
15 years 7 months ago
Mining closed relational graphs with connectivity constraints
Relational graphs are widely used in modeling large scale networks such as biological networks and social networks. In this kind of graph, connectivity becomes critical in identif...
Xifeng Yan, Xianghong Jasmine Zhou, Jiawei Han
ALENEX
2003
137views Algorithms» more  ALENEX 2003»
15 years 3 months ago
The Markov Chain Simulation Method for Generating Connected Power Law Random Graphs
Graph models for real-world complex networks such as the Internet, the WWW and biological networks are necessary for analytic and simulation-based studies of network protocols, al...
Christos Gkantsidis, Milena Mihail, Ellen W. Zegur...
AINA
2008
IEEE
15 years 8 months ago
Missing Value Estimation for Time Series Microarray Data Using Linear Dynamical Systems Modeling
The analysis of gene expression time series obtained from microarray experiments can be effectively exploited to understand a wide range of biological phenomena from the homeostat...
Connie Phong, Raul Singh