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BMCBI
2011
14 years 7 months ago
PhyloMap: an algorithm for visualizing relationships of large sequence data sets and its application to the influenza A virus ge
Background: Results of phylogenetic analysis are often visualized as phylogenetic trees. Such a tree can typically only include up to a few hundred sequences. When more than a few...
Jiajie Zhang, Amir Madany Mamlouk, Thomas Martinet...
BMCBI
2010
163views more  BMCBI 2010»
15 years 4 months ago
Integration of open access literature into the RCSB Protein Data Bank using BioLit
Background: Biological data have traditionally been stored and made publicly available through a variety of on-line databases, whereas biological knowledge has traditionally been ...
Andreas Prlic, Marco A. Martinez, Dimitris Dimitro...
BMCBI
2006
147views more  BMCBI 2006»
15 years 4 months ago
The NeuARt II system: a viewing tool for neuroanatomical data based on published neuroanatomical atlases
Background: Anatomical studies of neural circuitry describing the basic wiring diagram of the brain produce intrinsically spatial, highly complex data of great value to the neuros...
Gully A. P. C. Burns, Wei-Cheng Cheng, Richard H. ...
PPOPP
2010
ACM
16 years 1 months ago
Using data structure knowledge for efficient lock generation and strong atomicity
To achieve high-performance on multicore systems, sharedmemory parallel languages must efficiently implement atomic operations. The commonly used and studied paradigms for atomici...
Gautam Upadhyaya, Samuel P. Midkiff, Vijay S. Pai
HPCA
2000
IEEE
15 years 8 months ago
A Prefetching Technique for Irregular Accesses to Linked Data Structures
Prefetching offers the potential to improve the performance of linked data structure (LDS) traversals. However, previously proposed prefetching methods only work well when there i...
Magnus Karlsson, Fredrik Dahlgren, Per Stenstr&oum...