Multiple sequence alignment is a central problem in Bioinformatics. A known integer programming approach is to apply branch-and-cut to exponentially large graph-theoretic models. T...
Steven David Prestwich, Desmond G. Higgins, Orla O...
Abstract— Comparing genetic sequences is a well-known problem in bioinformatics. Newly determined sequences are being compared to known sequences stored in databases in order to ...
Philippe Faes, Bram Minnaert, Mark Christiaens, Er...
Abstract. We introduce dynamic communicating automata (DCA), an extension of communicating finite-state machines that allows for dynamic creation of processes. Their behavior can ...
Abstract. The analysis of message sequence charts (MSCs) is highly important in preventing common problems in communication protocols. Detecting race conditions, i.e., possible dis...
The prediction of protein function as well as the reconstruction of evolutionary genesis employing sequence comparison at large is still the most powerful tool in sequence analysi...