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BMCBI
2008
204views more  BMCBI 2008»
14 years 9 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...
BMCBI
2008
130views more  BMCBI 2008»
14 years 9 months ago
IDEA: Interactive Display for Evolutionary Analyses
Background: The availability of complete genomic sequences for hundreds of organisms promises to make obtaining genome-wide estimates of substitution rates, selective constraints ...
Amy Egan, Anup Mahurkar, Jonathan Crabtree, Jonath...
BMCBI
2004
111views more  BMCBI 2004»
14 years 9 months ago
The Hotdog fold: wrapping up a superfamily of thioesterases and dehydratases
Background: The Hotdog fold was initially identified in the structure of Escherichia coli FabA and subsequently in 4-hydroxybenzoyl-CoA thioesterase from Pseudomonas sp. strain CB...
Shane C. Dillon, Alex Bateman
JCB
2000
137views more  JCB 2000»
14 years 9 months ago
NOTUNG: A Program for Dating Gene Duplications and Optimizing Gene Family Trees
Large scale gene duplication is a major force driving the evolution of genetic functional innovation. Whole genome duplications are widely believed to have played an important rol...
Kevin Chen, Dannie Durand, Martin Farach-Colton
KDD
2005
ACM
92views Data Mining» more  KDD 2005»
15 years 9 months ago
Summarizing itemset patterns: a profile-based approach
Frequent-pattern mining has been studied extensively on scalable methods for mining various kinds of patterns including itemsets, sequences, and graphs. However, the bottleneck of...
Xifeng Yan, Hong Cheng, Jiawei Han, Dong Xin