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» Juggling with Pattern Matching
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ICANN
2011
Springer
14 years 4 months ago
Cross-Species Translation of Multi-way Biomarkers
Abstract. We present a Bayesian translational model for matching patterns in data sets which have neither co-occurring samples nor variables, but only a similar experiment design d...
Tommi Suvitaival, Ilkka Huopaniemi, Matej Oresic, ...
BMCBI
2008
158views more  BMCBI 2008»
15 years 25 days ago
Discovering gene annotations in biomedical text databases
Currently, most of the discovered biological and biomedical knowledge is available as textual data in scientific papers. And, locating and curating information about a genomic enti...
Ali Cakmak, Gultekin Özsoyoglu
BMCBI
2004
130views more  BMCBI 2004»
15 years 17 days ago
PATTERNFINDER: combined analysis of DNA regulatory sequences and double-helix stability
Background: Regulatory regions that function in DNA replication and gene transcription contain specific sequences that bind proteins as well as less-specific sequences in which th...
Yanlin Huang, David Kowalski
JSC
2010
103views more  JSC 2010»
14 years 11 months ago
Anti-patterns for rule-based languages
Negation is intrinsic to human thinking and most of the time when searching for something, we base our patterns on both positive and negative conditions. This should be naturally ...
Horatiu Cirstea, Claude Kirchner, Radu Kopetz, Pie...
96
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KDD
2002
ACM
144views Data Mining» more  KDD 2002»
16 years 1 months ago
Efficiently mining frequent trees in a forest
Mining frequent trees is very useful in domains like bioinformatics, web mining, mining semi-structured data, and so on. We formulate the problem of mining (embedded) subtrees in ...
Mohammed Javeed Zaki