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RECOMB
2005
Springer
15 years 11 months ago
Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks
Abstract. The interpretation of large-scale protein network data depends on our ability to identify significant sub-structures in the data, a computationally intensive task. Here w...
Jacob Scott, Trey Ideker, Richard M. Karp, Roded S...
STOC
2006
ACM
138views Algorithms» more  STOC 2006»
15 years 11 months ago
Searching dynamic point sets in spaces with bounded doubling dimension
We present a new data structure that facilitates approximate nearest neighbor searches on a dynamic set of points in a metric space that has a bounded doubling dimension. Our data...
Richard Cole, Lee-Ad Gottlieb
ICSE
2003
IEEE-ACM
15 years 10 months ago
Precise Dynamic Slicing Algorithms
Dynamic slicing algorithms can greatly reduce the debugging effort by focusing the attention of the user on a relevant subset of program statements. In this paper we present the d...
Xiangyu Zhang, Rajiv Gupta, Youtao Zhang
ICCD
2006
IEEE
123views Hardware» more  ICCD 2006»
15 years 7 months ago
Adding Debug Enhancements to Assertion Checkers for Hardware Emulation and Silicon Debug
Abstract— This paper presents techniques that enhance automatically generated hardware assertion checkers to facilitate debugging within the assertion-based verification paradig...
Marc Boule, Jean-Samuel Chenard, Zeljko Zilic
ASWEC
2009
IEEE
15 years 5 months ago
Change Propagation Analysis Using Domain Information
We propose a novel methodology for analysing change propagation in software using the domain-level behavioural model of a system. We hypothesize that change propagation analysis i...
Amir Aryani, Ian D. Peake, Margaret Hamilton, Hein...