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» Knowledge Representation on Design of Storm Drainage System
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BMCBI
2008
133views more  BMCBI 2008»
14 years 9 months ago
SPIKE - a database, visualization and analysis tool of cellular signaling pathways
Background: Biological signaling pathways that govern cellular physiology form an intricate web of tightly regulated interlocking processes. Data on these regulatory networks are ...
Ran Elkon, Rita Vesterman, Nira Amit, Igor Ulitsky...
TVCG
2008
147views more  TVCG 2008»
14 years 9 months ago
Cerebral: Visualizing Multiple Experimental Conditions on a Graph with Biological Context
Systems biologists use interaction graphs to model the behavior of biological systems at the molecular level. In an iterative process, such biologists observe the reactions of livi...
Aaron Barsky, Tamara Munzner, Jennifer L. Gardy, R...
ISMB
2007
14 years 12 months ago
A Chado case study: an ontology-based modular schema for representing genome-associated biological information
Motivation: A few years ago, FlyBase undertook to design a new database schema to store Drosophila data. It would fully integrate genomic sequence and annotation data with bibliog...
Chris Mungall, David B. Emmert
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JETAI
2007
131views more  JETAI 2007»
14 years 9 months ago
A computational architecture for heterogeneous reasoning
Reasoning, problem solving, indeed the general process of acquiring knowledge, is not an isolated, homogenous affair involving a one agent using a single form of representation, b...
Dave Barker-Plummer, John Etchemendy
PLDI
2003
ACM
15 years 2 months ago
A provably sound TAL for back-end optimization
Typed assembly languages provide a way to generate machinecheckable safety proofs for machine-language programs. But the soundness proofs of most existing typed assembly languages...
Juan Chen, Dinghao Wu, Andrew W. Appel, Hai Fang