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BMCBI
2011
14 years 1 months ago
PhyloMap: an algorithm for visualizing relationships of large sequence data sets and its application to the influenza A virus ge
Background: Results of phylogenetic analysis are often visualized as phylogenetic trees. Such a tree can typically only include up to a few hundred sequences. When more than a few...
Jiajie Zhang, Amir Madany Mamlouk, Thomas Martinet...
COCOA
2011
Springer
13 years 9 months ago
Algorithmic Aspects of Heterogeneous Biological Networks Comparison
Biological networks are commonly used to model molecular activity within the cell. Recent experimental studies have shown that the detection of conserved subnetworks across several...
Guillaume Blin, Guillaume Fertin, Hafedh Mohamed-B...
SIGIR
1998
ACM
15 years 2 months ago
Improved Algorithms for Topic Distillation in a Hyperlinked Environment
This paper addresses the problem of topic distillation on the World Wide Web, namely, given a typical user query to find quality documents related to the query topic. Connectivity...
Krishna Bharat, Monika Rauch Henzinger
BMCBI
2011
14 years 5 months ago
MRCQuant- an accurate LC/MS relative isotopic quantification algorithm on TOF instruments
Background: Relative isotope abundance quantification, which can be used for peptide identification and differential peptide quantification, plays an important role in liquid chro...
William H. Haskins, Konstantinos Petritis, Jianqiu...
BIRTHDAY
2011
Springer
13 years 10 months ago
Algorithmic Aspects of Risk Management
Abstract. Risk analysis has been used to manage the security of systems for several decades. However, its use has been limited to offline risk computation and manual response. In c...
Ashish Gehani, Lee Zaniewski, K. Subramani