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BMCBI
2006
100views more  BMCBI 2006»
15 years 6 months ago
DNPTrapper: an assembly editing tool for finishing and analysis of complex repeat regions
Background: Many genome projects are left unfinished due to complex, repeated regions. Finishing is the most time consuming step in sequencing and current finishing tools are not ...
Erik Arner, Martti T. Tammi, Anh-Nhi Tran, Ellen K...
160
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BMCBI
2007
139views more  BMCBI 2007»
15 years 6 months ago
Significance analysis of microarray transcript levels in time series experiments
Background: Microarray time series studies are essential to understand the dynamics of molecular events. In order to limit the analysis to those genes that change expression over ...
Barbara Di Camillo, Gianna Toffolo, Sreekumaran K....
157
Voted
JPDC
2007
173views more  JPDC 2007»
15 years 6 months ago
Probabilistic analysis on mesh network fault tolerance
Mesh networks are among the most important interconnection network topologies for large multicomputer systems. Mesh networks perform poorly in tolerating faults in the view of wor...
Jianer Chen, Gaocai Wang, Chuang Lin, Tao Wang, Gu...
BMCBI
2010
153views more  BMCBI 2010»
15 years 5 months ago
Pash 3.0: A versatile software package for read mapping and integrative analysis of genomic and epigenomic variation using massi
Background: Massively parallel sequencing readouts of epigenomic assays are enabling integrative genome-wide analyses of genomic and epigenomic variation. Pash 3.0 performs sequen...
Cristian Coarfa, Fuli Yu, Christopher A. Miller, Z...
192
Voted
CORR
2010
Springer
136views Education» more  CORR 2010»
15 years 4 months ago
Viewpoints: A high-performance high-dimensional exploratory data analysis tool
Scientific data sets continue to increase in both size and complexity. In the past, dedicated graphics systems at supercomputing centers were required to visualize large data sets,...
Paul R. Gazis, C. Levit, Michael J. Way