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BMCBI
2006
159views more  BMCBI 2006»
14 years 11 months ago
ProtRepeatsDB: a database of amino acid repeats in genomes
Background: Genome wide and cross species comparisons of amino acid repeats is an intriguing problem in biology mainly due to the highly polymorphic nature and diverse functions o...
Mridul K. Kalita, Gowthaman Ramasamy, Sekhar Durai...
KDD
2006
ACM
201views Data Mining» more  KDD 2006»
16 years 2 days ago
Clustering based large margin classification: a scalable approach using SOCP formulation
This paper presents a novel Second Order Cone Programming (SOCP) formulation for large scale binary classification tasks. Assuming that the class conditional densities are mixture...
J. Saketha Nath, Chiranjib Bhattacharyya, M. Naras...
SC
2009
ACM
15 years 6 months ago
Highly scalable genome assembly on campus grids
Bioinformatics researchers need efficient means to process large collections of sequence data. One application of interest, genome assembly, has great potential for parallelizati...
Christopher Moretti, Michael Olson, Scott J. Emric...
BMCBI
2010
135views more  BMCBI 2010»
14 years 11 months ago
GIGA: a simple, efficient algorithm for gene tree inference in the genomic age
Background: Phylogenetic relationships between genes are not only of theoretical interest: they enable us to learn about human genes through the experimental work on their relativ...
Paul D. Thomas
TCBB
2011
14 years 6 months ago
Data Mining on DNA Sequences of Hepatitis B Virus
: Extraction of meaningful information from large experimental datasets is a key element of bioinformatics research. One of the challenges is to identify genomic markers in Hepatit...
Kwong-Sak Leung, Kin-Hong Lee, Jin Feng Wang, Eddi...