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» Large scale genomic sequence SVM classifiers
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BMCBI
2004
252views more  BMCBI 2004»
14 years 11 months ago
Applying Support Vector Machines for Gene ontology based gene function prediction
Background: The current progress in sequencing projects calls for rapid, reliable and accurate function assignments of gene products. A variety of methods has been designed to ann...
Arunachalam Vinayagam, Rainer König, Jutta Mo...
91
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CLEF
2010
Springer
15 years 23 days ago
LEAR and XRCE's Participation to Visual Concept Detection Task - ImageCLEF 2010
In this paper we present the common effort of Lear and XRCE for the ImageCLEF Visual Concept Detection and Annotation Task. We first sought to combine our individual state-of-the-a...
Thomas Mensink, Gabriela Csurka, Florent Perronnin...
BMCBI
2010
111views more  BMCBI 2010»
14 years 11 months ago
Protein sequences classification by means of feature extraction with substitution matrices
Background: This paper deals with the preprocessing of protein sequences for supervised classification. Motif extraction is one way to address that task. It has been largely used ...
Rabie Saidi, Mondher Maddouri, Engelbert Mephu Ngu...
ISMB
2007
15 years 2 months ago
Automatic genome-wide reconstruction of phylogenetic gene trees
Gene duplication and divergence is a major evolutionary force. Despite the growing number of fully sequenced genomes, methods for investigating these events on a genome-wide scale...
Ilan Wapinski, Avi Pfeffer, Nir Friedman, Aviv Reg...
BMCBI
2010
101views more  BMCBI 2010»
14 years 11 months ago
Enrichment of homologs in insignificant BLAST hits by co-complex network alignment
Background: Homology is a crucial concept in comparative genomics. The algorithm probably most widely used for homology detection in comparative genomics, is BLAST. Usually a stri...
Like Fokkens, Sandra M. C. Botelho, Jos Boekhorst,...