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» Large scale hierarchical clustering of protein sequences
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BMCBI
2010
190views more  BMCBI 2010»
14 years 11 months ago
APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
Background: It is well known that most of the binding free energy of protein interaction is contributed by a few key hot spot residues. These residues are crucial for understandin...
Jun-Feng Xia, Xing-Ming Zhao, Jiangning Song, De-S...
CORR
2010
Springer
185views Education» more  CORR 2010»
14 years 11 months ago
Acdmcp: An adaptive and completely distributed multi-hop clustering protocol for wireless sensor networks
Clustering is a very popular network structuring technique which mainly addresses the issue of scalability in large scale Wireless Sensor Networks. Additionally, it has been shown...
Khalid Nawaz, Alejandro P. Buchmann
ALMOB
2007
151views more  ALMOB 2007»
14 years 11 months ago
Local sequence alignments statistics: deviations from Gumbel statistics in the rare-event tail
Background: The optimal score for ungapped local alignments of infinitely long random sequences is known to follow a Gumbel extreme value distribution. Less is known about the imp...
Stefan Wolfsheimer, Bernd Burghardt, Alexander K. ...
PDP
2008
IEEE
15 years 5 months ago
Routing Performance in a Hierarchical DHT-based Overlay Network
The scalability properties of DHT based overlay networks is considered satisfactory. However, in large scale systems this might still cause a problem since they have a logarithmic...
Isaías Martinez-Yelmo, Rubén Cuevas ...
ICML
2004
IEEE
15 years 12 months ago
Training conditional random fields via gradient tree boosting
Conditional Random Fields (CRFs; Lafferty, McCallum, & Pereira, 2001) provide a flexible and powerful model for learning to assign labels to elements of sequences in such appl...
Thomas G. Dietterich, Adam Ashenfelter, Yaroslav B...