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» Large scale hierarchical clustering of protein sequences
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BMCBI
2004
126views more  BMCBI 2004»
14 years 11 months ago
Visualization and analysis of microarray and gene ontology data with treemaps
Background: The increasing complexity of genomic data presents several challenges for biologists. Limited computer monitor views of data complexity and the dynamic nature of data ...
Eric H. Baehrecke, Niem Dang, Ketan Babaria, Ben S...
RECOMB
2009
Springer
15 years 11 months ago
Spatial Clustering of Multivariate Genomic and Epigenomic Information
The combination of fully sequence genomes and new technologies for high density arrays and ultra-rapid sequencing enables the mapping of generegulatory and epigenetics marks on a g...
Rami Jaschek, Amos Tanay
94
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BMCBI
2008
153views more  BMCBI 2008»
14 years 11 months ago
Version VI of the ESTree db: an improved tool for peach transcriptome analysis
Background: The ESTree database (db) is a collection of Prunus persica and Prunus dulcis EST sequences that in its current version encompasses 75,404 sequences from 3 almond and 1...
Barbara Lazzari, Andrea Caprera, Alberto Vecchiett...
IPPS
2006
IEEE
15 years 5 months ago
Parallel implementation of a quartet-based algorithm for phylogenetic analysis
This paper describes a parallel implementation of our recently developed algorithm for phylogenetic analysis on the IBM BlueGene/L cluster [15]. This algorithm constructs evolutio...
Bing Bing Zhou, Daniel Chu, Monther Tarawneh, Ping...
PAKDD
2010
ACM
193views Data Mining» more  PAKDD 2010»
14 years 9 months ago
As Time Goes by: Discovering Eras in Evolving Social Networks
Abstract. Within the large body of research in complex network analysis, an important topic is the temporal evolution of networks. Existing approaches aim at analyzing the evolutio...
Michele Berlingerio, Michele Coscia, Fosca Giannot...