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» Large scale hierarchical clustering of protein sequences
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101
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CCGRID
2009
IEEE
15 years 5 months ago
BLAST Application with Data-Aware Desktop Grid Middleware
—There exists numerous Grid middleware to develop and execute programs on the computational Grid, but they still require intensive work from their users. BitDew is made to facili...
Haiwu He, Gilles Fedak, Bing Tang, Franck Cappello
97
Voted
BMCBI
2008
187views more  BMCBI 2008»
14 years 11 months ago
PSAT: A web tool to compare genomic neighborhoods of multiple prokaryotic genomes
Background: The conservation of gene order among prokaryotic genomes can provide valuable insight into gene function, protein interactions, or events by which genomes have evolved...
Christine Fong, Laurence Rohmer, Matthew Radey, Mi...
110
Voted
BMCBI
2006
203views more  BMCBI 2006»
14 years 11 months ago
Independent component analysis reveals new and biologically significant structures in micro array data
Background: An alternative to standard approaches to uncover biologically meaningful structures in micro array data is to treat the data as a blind source separation (BSS) problem...
Attila Frigyesi, Srinivas Veerla, David Lindgren, ...
87
Voted
INFOCOM
2006
IEEE
15 years 5 months ago
A Locating-First Approach for Scalable Overlay Multicast
— Recent proposals in multicast overlay construction have demonstrated the importance of exploiting underlying network topology. However, these topology-aware proposals often rel...
Mohamed Ali Kâafar, Thierry Turletti, Walid ...
SC
2009
ACM
15 years 5 months ago
Highly scalable genome assembly on campus grids
Bioinformatics researchers need efficient means to process large collections of sequence data. One application of interest, genome assembly, has great potential for parallelizati...
Christopher Moretti, Michael Olson, Scott J. Emric...