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BMCBI
2010
126views more  BMCBI 2010»
15 years 1 months ago
PETALS: Proteomic Evaluation and Topological Analysis of a mutated Locus' Signaling
Background: Colon cancer is driven by mutations in a number of genes, the most notorious of which is Apc. Though much of Apc's signaling has been mechanistically identified o...
Gürkan Bebek, Vishal Patel, Mark R. Chance
CVPR
2008
IEEE
16 years 6 months ago
Correlational spectral clustering
We present a new method for spectral clustering with paired data based on kernel canonical correlation analysis, called correlational spectral clustering. Paired data are common i...
Matthew B. Blaschko, Christoph H. Lampert
BMCBI
2004
106views more  BMCBI 2004»
15 years 4 months ago
Spotting effect in microarray experiments
Background: Microarray data must be normalized because they suffer from multiple biases. We have identified a source of spatial experimental variability that significantly affects...
Tristan Mary-Huard, Jean-Jacques Daudin, Sté...
VLDB
2007
ACM
104views Database» more  VLDB 2007»
16 years 4 months ago
Extending Dependencies with Conditions
This paper introduces a class of conditional inclusion dependencies (CINDs), which extends traditional inclusion dependencies (INDs) by enforcing bindings of semantically related ...
Loreto Bravo, Wenfei Fan, Shuai Ma
BMCBI
2005
122views more  BMCBI 2005»
15 years 4 months ago
FACT - a framework for the functional interpretation of high-throughput experiments
Background: Interpreting the results of high-throughput experiments, such as those obtained from DNA-microarrays, is an often time-consuming task due to the high number of data-po...
Felix Kokocinski, Nicolas Delhomme, Gunnar Wrobel,...