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98
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BMCBI
2005
94views more  BMCBI 2005»
14 years 10 months ago
Measuring similarities between transcription factor binding sites
Background: Collections of transcription factor binding profiles (Transfac, Jaspar) are essential to identify regulatory elements in DNA sequences. Subsets of highly similar profi...
Szymon M. Kielbasa, Didier Gonze, Hanspeter Herzel
IEEEPACT
2002
IEEE
15 years 3 months ago
Optimizing Loop Performance for Clustered VLIW Architectures
Modern embedded systems often require high degrees of instruction-level parallelism (ILP) within strict constraints on power consumption and chip cost. Unfortunately, a high-perfo...
Yi Qian, Steve Carr, Philip H. Sweany
TPDS
2008
101views more  TPDS 2008»
14 years 10 months ago
An Energy-Oriented Evaluation of Buffer Cache Algorithms Using Parallel I/O Workloads
Power consumption is an important issue for cluster supercomputers as it directly affects running cost and cooling requirements. This paper investigates the memory energy efficienc...
Jianhui Yue, Yifeng Zhu, Zhao Cai
HPDC
1999
IEEE
15 years 2 months ago
Starfish: Fault-Tolerant Dynamic MPI Programs on Clusters of Workstations
This paper reports on the architecture and design of Starfish, an environment for executing dynamic (and static) MPI-2 programs on a cluster of workstations. Starfish is unique in ...
Adnan Agbaria, Roy Friedman
95
Voted
ACPC
1999
Springer
15 years 2 months ago
Parallel MPEG-2 Encoder on ATM and Ethernet-Connected Workstations
We present a software-based parallel MPEG-2 video encoder implemented on a cluster of workstations connected via an ATM switch and also via Ethernet. We exploit parallelism on a Gr...
Shahriar M. Akramullah, Ishfaq Ahmad, Ming L. Liou