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BMCBI
2008
133views more  BMCBI 2008»
14 years 9 months ago
ElliPro: a new structure-based tool for the prediction of antibody epitopes
Background: Reliable prediction of antibody, or B-cell, epitopes remains challenging yet highly desirable for the design of vaccines and immunodiagnostics. A correlation between a...
Julia V. Ponomarenko, Huynh-Hoa Bui, Wei Li, Nicho...
ISMB
2000
14 years 11 months ago
Search for a New Description of Protein Topology and Local Structure
A novel description of protein structure in terms of the generalized secondary structure elements (GSSE) is proposed. GSSE's are defined as fragments of the protein structure...
Lukasz Jaroszewski, Adam Godzik
EMNLP
2006
14 years 11 months ago
Automatic Construction of Predicate-argument Structure Patterns for Biomedical Information Extraction
This paper presents a method of automatically constructing information extraction patterns on predicate-argument structures (PASs) obtained by full parsing from a smaller training...
Akane Yakushiji, Yusuke Miyao, Tomoko Ohta, Yuka T...
BMCBI
2010
133views more  BMCBI 2010»
14 years 9 months ago
Predicting enzyme targets for cancer drugs by profiling human Metabolic reactions in NCI-60 cell lines
Background: Drugs can influence the whole metabolic system by targeting enzymes which catalyze metabolic reactions. The existence of interactions between drugs and metabolic react...
Limin Li, Xiaobo Zhou, Wai-Ki Ching, Ping Wang
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BMCBI
2007
114views more  BMCBI 2007»
14 years 9 months ago
Combination of scoring schemes for protein docking
Background: Docking algorithms are developed to predict in which orientation two proteins are likely to bind under natural conditions. The currently used methods usually consist o...
Philipp Heuser, Dietmar Schomburg