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IJDMB
2007
114views more  IJDMB 2007»
14 years 9 months ago
A parallel edge-betweenness clustering tool for Protein-Protein Interaction networks
: The increasing availability of protein-protein interaction graphs (PPI) requires new efficient tools capable of extracting valuable biological knowledge from these networks. Amon...
Qiaofeng Yang, Stefano Lonardi
IJCBDD
2010
127views more  IJCBDD 2010»
14 years 8 months ago
Predicting protein complexes by data integration of different types of interactions
: The explosion of highthroughput interaction data from proteomics studies gives us the opportunity to integrate Protein-Protein Interactions (PPI) from different type of interacti...
Powell Patrick Cheng Tan, Daryanaz Dargahi, Freder...
BMCBI
2010
95views more  BMCBI 2010»
14 years 9 months ago
Protein structure modelling and evaluation based on a 4-distance description of side-chain interactions
Background: Accurate evaluation and modelling of residue-residue interactions within and between proteins is a key aspect of computational structure prediction including homology ...
Vladimir Potapov, Mati Cohen, Yuval Inbar, Gideon ...
NAR
2008
223views more  NAR 2008»
14 years 9 months ago
AtPID: Arabidopsis thaliana protein interactome database - an integrative platform for plant systems biology
Arabidopsis thaliana Protein Interactome Database (AtPID) is an object database that integrates data from several bioinformatics prediction methods and manually collected informat...
Jian Cui, Peng Li, Guang Li, Feng Xu, Chen Zhao, Y...
CISIS
2008
IEEE
15 years 4 months ago
Hybrid Performance Modeling and Prediction of Large-Scale Computing Systems
Abstract—Performance is a key feature of large-scale computing systems. However, the achieved performance when a certain program is executed is significantly lower than the maxi...
Sabri Pllana, Siegfried Benkner, Fatos Xhafa, Leon...