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» Learning Methods for DNA Binding in Computational Biology
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KDD
2009
ACM
219views Data Mining» more  KDD 2009»
15 years 10 months ago
Structured correspondence topic models for mining captioned figures in biological literature
A major source of information (often the most crucial and informative part) in scholarly articles from scientific journals, proceedings and books are the figures that directly pro...
Amr Ahmed, Eric P. Xing, William W. Cohen, Robert ...
ICDM
2006
IEEE
122views Data Mining» more  ICDM 2006»
15 years 3 months ago
Optimal Segmentation Using Tree Models
Sequence data are abundant in application areas such as computational biology, environmental sciences, and telecommunications. Many real-life sequences have a strong segmental str...
Robert Gwadera, Aristides Gionis, Heikki Mannila
IJCAI
2007
14 years 11 months ago
Effective Control Knowledge Transfer through Learning Skill and Representation Hierarchies
Learning capabilities of computer systems still lag far behind biological systems. One of the reasons can be seen in the inefficient re-use of control knowledge acquired over the...
Mehran Asadi, Manfred Huber
BMCBI
2007
133views more  BMCBI 2007»
14 years 9 months ago
MATLIGN: a motif clustering, comparison and matching tool
Background: Sequence motifs representing transcription factor binding sites (TFBS) are commonly encoded as position frequency matrices (PFM) or degenerate consensus sequences (CS)...
Matti Kankainen, Ari Löytynoja
BMCBI
2011
14 years 4 months ago
SAQC: SNP array quality control
Background: Genome-wide single-nucleotide polymorphism (SNP) arrays containing hundreds of thousands of SNPs from the human genome have proven useful for studying important human ...
Hsin-Chou Yang, Hsin-Chi Lin, Meijyh Kang, Chun-Ho...