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BIOINFORMATICS
2006
124views more  BIOINFORMATICS 2006»
14 years 9 months ago
Probabilistic inference of transcription factor concentrations and gene-specific regulatory activities
Motivation Quantitative estimation of the regulatory relationship between transcription factors and genes is a fundamental stepping stone when trying to develop models of cellular...
Guido Sanguinetti, Neil D. Lawrence, Magnus Rattra...
EDBT
2008
ACM
178views Database» more  EDBT 2008»
15 years 9 months ago
An inductive database and query language in the relational model
In the demonstration, we will present the concepts and an implementation of an inductive database ? as proposed by Imielinski and Mannila ? in the relational model. The goal is to...
Lothar Richter, Jörg Wicker, Kristina Kessler...
BMCBI
2010
171views more  BMCBI 2010»
14 years 9 months ago
PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data
Background: Cluster analysis is an important technique for the exploratory analysis of biological data. Such data is often high-dimensional, inherently noisy and contains outliers...
Benjamin Georgi, Ivan Gesteira Costa, Alexander Sc...
BMCBI
2007
153views more  BMCBI 2007»
14 years 9 months ago
A new pairwise kernel for biological network inference with support vector machines
Background: Much recent work in bioinformatics has focused on the inference of various types of biological networks, representing gene regulation, metabolic processes, protein-pro...
Jean-Philippe Vert, Jian Qiu, William Stafford Nob...
IMSCCS
2006
IEEE
15 years 3 months ago
Frequency Distribution of TATA Box and Extension Sequences on Human Promoters
Background: TATA box is one of the most important transcription factor binding sites. But the exact sequences of TATA box are still not very clear. Results: In this study, we cond...
Wei Shi, Wanlei Zhou