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ECCB
2005
IEEE
15 years 7 months ago
A query language for biological networks
Many areas of modern biology are concerned with the management, storage, visualization, comparison, and analysis of networks. For instance, networks are used to model signal trans...
Ulf Leser
GECCO
2005
Springer
124views Optimization» more  GECCO 2005»
15 years 7 months ago
Evolving petri nets to represent metabolic pathways
Given concentrations of metabolites over a sequence of time steps, the metabolic pathway prediction problem seeks a set of reactions and rate constants for them that could yield t...
Jeremiah Nummela, Bryant A. Julstrom
89
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WPES
2004
ACM
15 years 7 months ago
Private collaborative forecasting and benchmarking
Suppose a number of hospitals in a geographic area want to learn how their own heart-surgery unit is doing compared with the others in terms of mortality rates, subsequent complic...
Mikhail J. Atallah, Marina Bykova, Jiangtao Li, Ke...
NIPS
2003
15 years 3 months ago
Max-Margin Markov Networks
In typical classification tasks, we seek a function which assigns a label to a single object. Kernel-based approaches, such as support vector machines (SVMs), which maximize the ...
Benjamin Taskar, Carlos Guestrin, Daphne Koller
BMCBI
2006
140views more  BMCBI 2006»
15 years 1 months ago
SNP-PHAGE - High throughput SNP discovery pipeline
Background: Single nucleotide polymorphisms (SNPs) as defined here are single base sequence changes or short insertion/deletions between or within individuals of a given species. ...
Lakshmi K. Matukumalli, John J. Grefenstette, Davi...