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112
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BMCBI
2008
83views more  BMCBI 2008»
15 years 3 months ago
Models of deletion for visualizing bacterial variation: an application to tuberculosis spoligotypes
Background: Molecular typing methods are commonly used to study genetic relationships among bacterial isolates. Many of these methods have become standardized and produce portable...
Josephine F. Reyes, Andrew R. Francis, Mark M. Tan...
156
Voted
BMCBI
2006
172views more  BMCBI 2006»
15 years 3 months ago
BioWarehouse: a bioinformatics database warehouse toolkit
Background: This article addresses the problem of interoperation of heterogeneous bioinformatics databases. Results: We introduce BioWarehouse, an open source toolkit for construc...
Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Pr...
129
Voted
BMCBI
2006
128views more  BMCBI 2006»
15 years 3 months ago
Construction of a nasopharyngeal carcinoma 2D/MS repository with Open Source XML Database - Xindice
Background: Many proteomics initiatives require integration of all information with uniformcriteria from collection of samples and data display to publication of experimental resu...
Feng Li, Maoyu Li, Zhiqiang Xiao, Pengfei Zhang, J...
141
Voted
BMCBI
2006
116views more  BMCBI 2006»
15 years 3 months ago
A model-based approach to selection of tag SNPs
Background: Single Nucleotide Polymorphisms (SNPs) are the most common type of polymorphisms found in the human genome. Effective genetic association studies require the identific...
Pierre Nicolas, Fengzhu Sun, Lei M. Li
194
Voted
SDM
2011
SIAM
284views Data Mining» more  SDM 2011»
14 years 6 months ago
The Network Completion Problem: Inferring Missing Nodes and Edges in Networks
While the social and information networks have become ubiquitous, the challenge of collecting complete network data still persists. Many times the collected network data is incomp...
Myunghwan Kim 0002, Jure Leskovec