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» Learning with Annotation Noise
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79
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BMCBI
2007
116views more  BMCBI 2007»
14 years 9 months ago
Clustering protein environments for function prediction: finding PROSITE motifs in 3D
Background: Structural genomics initiatives are producing increasing numbers of threedimensional (3D) structures for which there is little functional information. Structure-based ...
Sungroh Yoon, Jessica C. Ebert, Eui-Young Chung, G...
91
Voted
NAR
2006
142views more  NAR 2006»
14 years 9 months ago
miRNAMap: genomic maps of microRNA genes and their target genes in mammalian genomes
Recent work has demonstrated that microRNAs (miRNAs) are involved in critical biological processes by suppressing the translation of coding genes. This work develops an integrated...
Paul Wei-Che Hsu, Hsien-Da Huang, Sheng-Da Hsu, Li...
TASLP
2008
140views more  TASLP 2008»
14 years 9 months ago
Acoustic Chord Transcription and Key Extraction From Audio Using Key-Dependent HMMs Trained on Synthesized Audio
We describe an acoustic chord transcription system that uses symbolic data to train hidden Markov models and gives best-of-class frame-level recognition results. We avoid the extre...
Kyogu Lee, Malcolm Slaney
BMCBI
2005
151views more  BMCBI 2005»
14 years 9 months ago
stam - a Bioconductor compliant R package for structured analysis of microarray data
Background: Genome wide microarray studies have the potential to unveil novel disease entities. Clinically homogeneous groups of patients can have diverse gene expression profiles...
Claudio Lottaz, Rainer Spang
BMCBI
2005
155views more  BMCBI 2005»
14 years 9 months ago
Mining protein function from text using term-based support vector machines
Background: Text mining has spurred huge interest in the domain of biology. The goal of the BioCreAtIvE exercise was to evaluate the performance of current text mining systems. We...
Simon B. Rice, Goran Nenadic, Benjamin J. Stapley