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189
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BMCBI
2011
14 years 7 months ago
Protein alignment algorithms with an efficient backtracking routine on multiple GPUs
Background: Pairwise sequence alignment methods are widely used in biological research. The increasing number of sequences is perceived as one of the upcoming challenges for seque...
Jacek Blazewicz, Wojciech Frohmberg, Michal Kierzy...
158
Voted
PLDI
2012
ACM
13 years 6 months ago
Scalable and precise dynamic datarace detection for structured parallelism
Existing dynamic race detectors suffer from at least one of the following three limitations: (i) space overhead per memory location grows linearly with the number of parallel thre...
Raghavan Raman, Jisheng Zhao, Vivek Sarkar, Martin...
220
Voted
ICDE
1999
IEEE
151views Database» more  ICDE 1999»
16 years 5 months ago
Data Integration by Describing Sources with Constraint Databases
We develop a data integration approach for the efficient evaluation of queries over autonomous source databases. The approach is based on some novel applications and extensions of...
Xun Cheng, Guozhu Dong, Tzekwan Lau, Jianwen Su
124
Voted
DAC
2004
ACM
16 years 4 months ago
Virtual memory window for application-specific reconfigurable coprocessors
Reconfigurable Systems-on-Chip (SoCs) on the market consist of full-fledged processors and large Field-Programmable Gate-Arrays (FPGAs). The latter can be used to implement the sy...
Miljan Vuletic, Laura Pozzi, Paolo Ienne
130
Voted
IPMI
2005
Springer
16 years 4 months ago
Extrapolation of Sparse Tensor Fields: Application to the Modeling of Brain Variability
Modeling the variability of brain structures is a fundamental problem in the neurosciences. In this paper, we start from a dataset of precisely delineated anatomical structures in ...
Pierre Fillard, Vincent Arsigny, Xavier Pennec, Pa...