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BMCBI
2010
133views more  BMCBI 2010»
14 years 11 months ago
Stability analysis of the GAL regulatory network in Saccharomyces cerevisiae and Kluyveromyces lactis
Background: In the yeast Saccharomyces cerevisiae, interactions between galactose, Gal3p, Gal80p, and Gal4p determine the transcriptional status of the genes required for the gala...
Vishwesh V. Kulkarni, Venkatesh Kareenhalli, Pushk...
BMCBI
2007
161views more  BMCBI 2007»
14 years 11 months ago
Efficient classification of complete parameter regions based on semidefinite programming
Background: Current approaches to parameter estimation are often inappropriate or inconvenient for the modelling of complex biological systems. For systems described by nonlinear ...
Lars Kuepfer, Uwe Sauer, Pablo A. Parrilo
AB
2007
Springer
15 years 5 months ago
Algorithmic Algebraic Model Checking IV: Characterization of Metabolic Networks
A series of papers, all under the title of Algorithmic Algebraic Model Checking (AAMC), has sought to combine techniques from algorithmic algebra, model checking and dynamical syst...
Venkatesh Mysore, Bud Mishra
IMC
2007
ACM
15 years 1 months ago
Network loss inference with second order statistics of end-to-end flows
We address the problem of calculating link loss rates from end-to-end measurements. Contrary to existing works that use only the average end-to-end loss rates or strict temporal c...
Hung Xuan Nguyen, Patrick Thiran
LCPC
1998
Springer
15 years 3 months ago
HPF-2 Support for Dynamic Sparse Computations
There is a class of sparse matrix computations, such as direct solvers of systems of linear equations, that change the fill-in (nonzero entries) of the coefficient matrix, and invo...
Rafael Asenjo, Oscar G. Plata, Juan Touriño...