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BIBE
2007
IEEE
138views Bioinformatics» more  BIBE 2007»
15 years 4 months ago
A Flexible Stem-Based Local Search Algorithm for Predicting RNA Secondary Structures Including Pseudoknots
-We demonstrate a new algorithm named FlexStem to predict RNA secondary structures with pseudoknots. Our approach is based on the free energy minimization criterion, and utilizes a...
Xiang Chen, Simin He, Dongbo Bu, Runsheng Chen, We...
ICGA
1997
122views Optimization» more  ICGA 1997»
14 years 11 months ago
A Comparison of Global and Local Search Methods in Drug Docking
Molecular docking software makes computational predictions of the interaction of molecules. This can be useful, for example, in evaluating the binding of candidate drug molecules ...
Christopher D. Rosin, R. Scott Halliday, William E...
PPL
2010
117views more  PPL 2010»
14 years 4 months ago
Neighborhood Structures for GPU-Based Local Search Algorithms
Local search (LS) algorithms are among the most powerful techniques for solving computationally hard problems in combinatorial optimization. These algorithms could be viewed as &q...
Thé Van Luong, Nouredine Melab, El-Ghazali ...
CCCG
2010
14 years 11 months ago
Fast local searches and updates in bounded universes
Given a bounded universe {0, 1, . . . , U-1}, we show how to perform (successor) searches in O(log log ) expected time and updates in O(log log ) expected amortized time, where i...
Prosenjit Bose, Karim Douïeb, Vida Dujmovic, ...
SPIESR
2000
104views Database» more  SPIESR 2000»
14 years 11 months ago
Feature localization and search by object model under illumination change
Color object recognition methods that are based on image retrieval algorithms can handle changes of illumination via image normalization, e.g. simple color-channel-normalization1 ...
Mark S. Drew, Zinovi Tauber, Ze-Nian Li