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BMCBI
2010
136views more  BMCBI 2010»
14 years 10 months ago
SCPS: a fast implementation of a spectral method for detecting protein families on a genome-wide scale
Background: An important problem in genomics is the automatic inference of groups of homologous proteins from pairwise sequence similarities. Several approaches have been proposed...
Tamás Nepusz, Rajkumar Sasidharan, Alberto ...
BMCBI
2010
125views more  BMCBI 2010»
14 years 10 months ago
Compartmentalization of the Edinburgh Human Metabolic Network
Background: Direct in vivo investigation of human metabolism is complicated by the distinct metabolic functions of various sub-cellular organelles. Diverse micro-environments in d...
Tong Hao, Hongwu Ma, Xue-Ming Zhao, Igor Goryanin
MICRO
2010
IEEE
130views Hardware» more  MICRO 2010»
14 years 7 months ago
Pseudo-Circuit: Accelerating Communication for On-Chip Interconnection Networks
As the number of cores on a single chip increases with more recent technologies, a packet-switched on-chip interconnection network has become a de facto communication paradigm for ...
Minseon Ahn, Eun Jung Kim
ICNP
2009
IEEE
15 years 4 months ago
CUBS: Coordinated Upload Bandwidth Sharing in Residential Networks
— Millions of residential users are widely served by cable or DSL connections with modest upload bandwidth and relatively high download bandwidth. For the increasingly important ...
Enhua Tan, Lei Guo, Songqing Chen, Xiaodong Zhang
NIPS
2003
14 years 11 months ago
Minimax Embeddings
Spectral methods for nonlinear dimensionality reduction (NLDR) impose a neighborhood graph on point data and compute eigenfunctions of a quadratic form generated from the graph. W...
Matthew Brand