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» Lock-free parallel dynamic programming
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110
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IPPS
2003
IEEE
15 years 8 months ago
Sequence Alignment on the Cray MTA-2
The standard algorithm for alignment of DNA sequences using dynamic programming has been implemented on the Cray MTA-2 (Multithreaded Architecture-2) at ENRI (Electronic Navigatio...
Shahid H. Bokhari, Jon R. Sauer
166
Voted
WOMPAT
2004
Springer
15 years 8 months ago
Dragon: A Static and Dynamic Tool for OpenMP
A program analysis tool can play an important role in helping users understand and improve OpenMP codes. Dragon is a robust interactive program analysis tool based on the Open64 co...
Oscar Hernandez, Chunhua Liao, Barbara M. Chapman
CONCURRENCY
1998
139views more  CONCURRENCY 1998»
15 years 3 months ago
Applications experience in Jade
This paper presents our experience developing applications in Jade, a portable, implicitly parallel programming language designed for exploiting task-level concurrency. Jade progr...
Martin C. Rinard
SC
2000
ACM
15 years 7 months ago
Scalable Molecular Dynamics for Large Biomolecular Systems
We present an optimized parallelization scheme for molecular dynamics simulations of large biomolecular systems, implemented in the production-quality molecular dynamics program N...
Robert Brunner, James C. Phillips, Laxmikant V. Ka...
IPPS
2009
IEEE
15 years 10 months ago
Work-first and help-first scheduling policies for async-finish task parallelism
Multiple programming models are emerging to address an increased need for dynamic task parallelism in applications for multicore processors and shared-address-space parallel compu...
Yi Guo, Rajkishore Barik, Raghavan Raman, Vivek Sa...