The standard algorithm for alignment of DNA sequences using dynamic programming has been implemented on the Cray MTA-2 (Multithreaded Architecture-2) at ENRI (Electronic Navigatio...
A program analysis tool can play an important role in helping users understand and improve OpenMP codes. Dragon is a robust interactive program analysis tool based on the Open64 co...
This paper presents our experience developing applications in Jade, a portable, implicitly parallel programming language designed for exploiting task-level concurrency. Jade progr...
We present an optimized parallelization scheme for molecular dynamics simulations of large biomolecular systems, implemented in the production-quality molecular dynamics program N...
Robert Brunner, James C. Phillips, Laxmikant V. Ka...
Multiple programming models are emerging to address an increased need for dynamic task parallelism in applications for multicore processors and shared-address-space parallel compu...
Yi Guo, Rajkishore Barik, Raghavan Raman, Vivek Sa...