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BMCBI
2010
190views more  BMCBI 2010»
14 years 10 months ago
APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
Background: It is well known that most of the binding free energy of protein interaction is contributed by a few key hot spot residues. These residues are crucial for understandin...
Jun-Feng Xia, Xing-Ming Zhao, Jiangning Song, De-S...
GCB
2009
Springer
180views Biometrics» more  GCB 2009»
15 years 4 months ago
2D Projections of RNA Folding Landscapes
Abstract: The analysis of RNA folding landscapes yields insights into the kinetic folding behavior not available from classical structure prediction methods. This is especially imp...
Ronny Lorenz, Christoph Flamm, Ivo L. Hofacker
CSB
2005
IEEE
140views Bioinformatics» more  CSB 2005»
15 years 3 months ago
TPR Packing Analysis and 3D Modeling for the HAT Domain of Human Crooked Neck Protein
Human crooked neck protein (hcrn) containing 17 HAT or TPR repeats plays a role in pre-mRNA processing. Conserved residues in the TPR consensus sequence of 34 aa were found at hel...
Zhenglin Hou, Cunxi Wang, Odd-Arne Olsen
IEEECIT
2005
IEEE
15 years 3 months ago
Case Study: Distance-Based Image Retrieval in the MoBIoS DBMS
Similarity search leveraging distance-based index structures is increasingly being used for complex data types. It has been shown that for high dimensional uniform vectors with si...
Rui Mao, Wenguo Liu, Daniel P. Miranker, Qasim Iqb...
PPSN
1998
Springer
15 years 2 months ago
On Genetic Algorithms and Lindenmayer Systems
This paper describes a system for simulating the evolution of artificial 2D plant morphologies. Virtual plant genotypes are inspired by the mathematical formalism known as Lindenma...
Gabriela Ochoa