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CPM
2004
Springer
108views Combinatorics» more  CPM 2004»
15 years 7 months ago
Quadratic Time Algorithms for Finding Common Intervals in Two and More Sequences
A popular approach in comparative genomics is to locate groups or clusters of orthologous genes in multiple genomes and to postulate functional association between the genes contai...
Thomas Schmidt, Jens Stoye
IPPS
2006
IEEE
15 years 7 months ago
Parallel implementation of a quartet-based algorithm for phylogenetic analysis
This paper describes a parallel implementation of our recently developed algorithm for phylogenetic analysis on the IBM BlueGene/L cluster [15]. This algorithm constructs evolutio...
Bing Bing Zhou, Daniel Chu, Monther Tarawneh, Ping...
DATE
2009
IEEE
113views Hardware» more  DATE 2009»
15 years 8 months ago
Algorithms for the automatic extension of an instruction-set
Abstract—In this paper, two general algorithms for the automatic generation of instruction-set extensions are presented. The basic instruction set of a reconfigurable architectu...
Carlo Galuzzi, Dimitris Theodoropoulos, Roel Meeuw...
GECCO
2005
Springer
129views Optimization» more  GECCO 2005»
15 years 7 months ago
Post-processing clustering to reduce XCS variability
XCS is a stochastic algorithm, so it does not guarantee to produce the same results when run with the same input. When interpretability matters, obtaining a single, stable result ...
Flavio Baronti, Alessandro Passaro, Antonina Stari...
ADMA
2009
Springer
145views Data Mining» more  ADMA 2009»
15 years 8 months ago
A Framework for Multi-Objective Clustering and Its Application to Co-Location Mining
The goal of multi-objective clustering (MOC) is to decompose a dataset into similar groups maximizing multiple objectives in parallel. In this paper, we provide a methodology, arch...
Rachsuda Jiamthapthaksin, Christoph F. Eick, Ricar...