In recent work we have presented a formal framework for linguistic annotation based on labeled acyclic digraphs. These `annotation graphs' oer a simple yet powerful method fo...
It is commonly accepted that genes with similar expression profiles are functionally related. However, there are many ways one can measure the similarity of expression profiles, a...
Golan Yona, William Dirks, Shafquat Rahman, David ...
Background: High-throughput sequencing technologies, such as the Illumina Genome Analyzer, are powerful new tools for investigating a wide range of biological and medical question...
James H. Bullard, Elizabeth Purdom, Kasper D. Hans...
Background: The definition of a distance measure plays a key role in the evaluation of different clustering solutions of gene expression profiles. In this empirical study we compa...
Graphs are well-known, well-understood, and frequently used means to depict networks of related items. They are successfully used as the underlying mathematical concept in various ...