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» MAP: Searching Large Genome Databases
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BMCBI
2011
14 years 6 months ago
AnyExpress: Integrated toolkit for analysis of cross-platform gene expression data using a fast interval matching algorithm
Background: Cross-platform analysis of gene express data requires multiple, intricate processes at different layers with various platforms. However, existing tools handle only a s...
Jihoon Kim, Kiltesh Patel, Hyunchul Jung, Winston ...
SIGMOD
2009
ACM
213views Database» more  SIGMOD 2009»
15 years 12 months ago
Dictionary-based order-preserving string compression for main memory column stores
Column-oriented database systems [19, 23] perform better than traditional row-oriented database systems on analytical workloads such as those found in decision support and busines...
Carsten Binnig, Stefan Hildenbrand, Franz Fär...
BMCBI
2006
159views more  BMCBI 2006»
14 years 11 months ago
MultiSeq: unifying sequence and structure data for evolutionary analysis
Background: Since the publication of the first draft of the human genome in 2000, bioinformatic data have been accumulating at an overwhelming pace. Currently, more than 3 million...
Elijah Roberts, John Eargle, Dan Wright, Zaida Lut...
NAR
2007
135views more  NAR 2007»
14 years 11 months ago
g: Profiler - a web-based toolset for functional profiling of gene lists from large-scale experiments
g:Profiler (http://biit.cs.ut.ee/gprofiler/) is a public web server for characterising and manipulating gene lists resulting from mining high-throughput genomic data. g:Profiler h...
Jüri Reimand, Meelis Kull, Hedi Peterson, Jaa...
CEC
2010
IEEE
15 years 23 days ago
A modified genetic algorithm for matching building sets with the histograms of forces
Abstract--This paper presents an approach to the task of locating a group of buildings based solely on their relative spatial relationships. This situation can occur in the problem...
Andrew R. Buck, James M. Keller, Marjorie Skubic