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BMCBI
2008
116views more  BMCBI 2008»
15 years 2 months ago
IgTM: An algorithm to predict transmembrane domains and topology in proteins
Background: Due to their role of receptors or transporters, membrane proteins play a key role in many important biological functions. In our work we used Grammatical Inference (GI...
Piedachu Peris, Damián López, Marcel...
109
Voted
ESOA
2006
15 years 5 months ago
Dynamic Decentralized Any-Time Hierarchical Clustering
Hierarchical clustering is used widely to organize data and search for patterns. Previous algorithms assume that the body of data being clustered is fixed while the algorithm runs...
H. Van Dyke Parunak, Richard Rohwer, Theodore C. B...
114
Voted
CORR
2012
Springer
209views Education» more  CORR 2012»
13 years 10 months ago
Densest Subgraph in Streaming and MapReduce
The problem of finding locally dense components of a graph is an important primitive in data analysis, with wide-ranging applications from community mining to spam detection and ...
Bahman Bahmani, Ravi Kumar, Sergei Vassilvitskii
108
Voted
DSN
2006
IEEE
15 years 8 months ago
The Startup Problem in Fault-Tolerant Time-Triggered Communication
Fault-tolerant time-triggered communication relies on the synchronization of local clocks. The startup problem is the problem of reaching a sufficient degree of synchronization a...
Wilfried Steiner, Hermann Kopetz
GRID
2004
Springer
15 years 7 months ago
High Performance Threaded Data Streaming for Large Scale Simulations
We have developed a threaded parallel data streaming approach using Logistical Networking (LN) to transfer multi-terabyte simulation data from computers at NERSC to our local anal...
Viraj Bhat, Scott Klasky, Scott Atchley, Micah Bec...