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» Magic Sets and Their Application to Data Integration
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ISMB
2007
15 years 3 days ago
A Chado case study: an ontology-based modular schema for representing genome-associated biological information
Motivation: A few years ago, FlyBase undertook to design a new database schema to store Drosophila data. It would fully integrate genomic sequence and annotation data with bibliog...
Chris Mungall, David B. Emmert
AUIC
2006
IEEE
15 years 3 months ago
A framework for interactive web-based visualization
As the power of end user web browsers increases, the delivery of sophisticated visualizations of information via the web becomes possible. However no technology exists that offers...
Nathan Holmberg, Burkhard Wünsche, Ewan D. Te...
BMCBI
2010
175views more  BMCBI 2010»
14 years 10 months ago
The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services
Background: Many complementary solutions are available for the identifier mapping problem. This creates an opportunity for bioinformatics tool developers. Tools can be made to fle...
Martijn P. van Iersel, Alexander R. Pico, Thomas K...
BMCBI
2008
135views more  BMCBI 2008»
14 years 10 months ago
Facilitating the development of controlled vocabularies for metabolomics technologies with text mining
Background: Many bioinformatics applications rely on controlled vocabularies or ontologies to consistently interpret and seamlessly integrate information scattered across public r...
Irena Spasic, Daniel Schober, Susanna-Assunta Sans...
FCCM
2009
IEEE
192views VLSI» more  FCCM 2009»
15 years 4 months ago
FPGA Floating Point Datapath Compiler
This paper will describe the architecture of a compiler which will convert an untimed C description of a set of floating point expressions into a synthesizable datapath optimized ...
Martin Langhammer, Tom VanCourt