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» Managing Biological Data using bdbms
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BMCBI
2006
122views more  BMCBI 2006»
14 years 11 months ago
BioMoby extensions to the Taverna workflow management and enactment software
Background: As biology becomes an increasingly computational science, it is critical that we develop software tools that support not only bioinformaticians, but also bench biologi...
Edward A. Kawas, Martin Senger, Mark D. Wilkinson
VLDB
2004
ACM
128views Database» more  VLDB 2004»
15 years 5 months ago
An Annotation Management System for Relational Databases
We present an annotation management system for relational databases. In this system, every piece of data in a relation is assumed to have zero or more annotations associated with ...
Deepavali Bhagwat, Laura Chiticariu, Wang Chiew Ta...
BMCBI
2011
14 years 6 months ago
PheMaDB: A solution for storage, retrieval, and analysis of high throughput phenotype data
Background: OmniLog™ phenotype microarrays (PMs) have the capability to measure and compare the growth responses of biological samples upon exposure to hundreds of growth condit...
Wenling E. Chang, Keri Sarver, Brandon W. Higgs, T...
KDD
2005
ACM
139views Data Mining» more  KDD 2005»
16 years 3 days ago
Reasoning about sets using redescription mining
Redescription mining is a newly introduced data mining problem that seeks to find subsets of data that afford multiple definitions. It can be viewed as a generalization of associa...
Mohammed Javeed Zaki, Naren Ramakrishnan
KDD
2004
ACM
137views Data Mining» more  KDD 2004»
15 years 5 months ago
Mining scale-free networks using geodesic clustering
Many real-world graphs have been shown to be scale-free— vertex degrees follow power law distributions, vertices tend to cluster, and the average length of all shortest paths is...
Andrew Y. Wu, Michael Garland, Jiawei Han