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» Managing Biological Data using bdbms
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BMCBI
2010
121views more  BMCBI 2010»
14 years 9 months ago
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences
Background: We propose a sequence clustering algorithm and compare the partition quality and execution time of the proposed algorithm with those of a popular existing algorithm. T...
David J. Russell, Samuel F. Way, Andrew K. Benson,...
CSB
2005
IEEE
139views Bioinformatics» more  CSB 2005»
15 years 5 months ago
Open Microscopy Environment
High-throughput scoring of image-based biological assays heavily depends on the extraction of quantitative numerical information from microscopy images. This paper describes how t...
Ilya G. Goldberg
SIGMOD
2008
ACM
103views Database» more  SIGMOD 2008»
15 years 12 months ago
XArch: archiving scientific and reference data
Database archiving is important for the retrieval of old versions of a database and for temporal queries over the history of data. We demonstrate XArch, a management system for ma...
Heiko Müller, Ioannis Koltsidas, Peter Bunema...
DAWAK
2001
Springer
15 years 4 months ago
Adaptable Similarity Search Using Vector Quantization
Adaptable similarity queries based on quadratic form distance functions are widely popular in data mining applications, particularly for domains such as multimedia, CAD, molecular ...
Christian Böhm, Hans-Peter Kriegel, Thomas Se...
WWW
2007
ACM
16 years 11 days ago
Adding Value to Biodiversity Images Through Community Annotation
Morphbank, an on-line collection of museum-quality biological images, is an NSF funded project designed to facilitate the on-line collaboration of biologists from around the world...
Gregory A. Riccardi