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» Managing large datasets with iRODS - a performance analyses
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PC
2002
189views Management» more  PC 2002»
14 years 9 months ago
Data management and transfer in high-performance computational grid environments
An emerging class of data-intensive applications involve the geographically dispersed extraction of complex scientific information from very large collections of measured or compu...
William E. Allcock, Joseph Bester, John Bresnahan,...
WABI
2009
Springer
117views Bioinformatics» more  WABI 2009»
15 years 4 months ago
A Simulation Study Comparing Supertree and Combined Analysis Methods Using SMIDGen
Background: Supertree methods comprise one approach to reconstructing large molecular phylogenies given multi-marker datasets: trees are estimated on each marker and then combined...
M. Shel Swenson, François Barbançon,...
76
Voted
BMCBI
2010
135views more  BMCBI 2010»
14 years 9 months ago
Efficient genome-scale phylogenetic analysis under the duplication-loss and deep coalescence cost models
Background: Genomic data provide a wealth of new information for phylogenetic analysis. Yet making use of this data requires phylogenetic methods that can efficiently analyze extr...
Mukul S. Bansal, J. Gordon Burleigh, Oliver Eulens...
BMCBI
2010
164views more  BMCBI 2010»
14 years 7 months ago
Merged consensus clustering to assess and improve class discovery with microarray data
Background: One of the most commonly performed tasks when analysing high throughput gene expression data is to use clustering methods to classify the data into groups. There are a...
T. Ian Simpson, J. Douglas Armstrong, Andrew P. Ja...
75
Voted
PPPJ
2009
ACM
15 years 4 months ago
Tracking performance across software revisions
Repository-based revision control systems such as CVS, RCS, Subversion, and GIT, are extremely useful tools that enable software developers to concurrently modify source code, man...
Nagy Mostafa, Chandra Krintz