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ISMB
1996
15 years 6 months ago
Finding Genes in DNA Using Decision Trees and Dynamic Programming
This study demonstratesthe use of decision tree classifiers as the basis for a general gene-finding system. The system uses a dynamic programmingalgorithm that. finds the optimal ...
Steven Salzberg, Xin Chen, John Henderson, Kenneth...
TCBB
2010
114views more  TCBB 2010»
15 years 3 months ago
Cache-Oblivious Dynamic Programming for Bioinformatics
— We present efficient cache-oblivious algorithms for some well-studied string problems in bioinformatics including the longest common subsequence, global pairwise sequence alig...
Rezaul Alam Chowdhury, Hai-son Le, Vijaya Ramachan...
VLDB
1991
ACM
179views Database» more  VLDB 1991»
15 years 8 months ago
A Relationship Mechanism for a Strongly Typed Object-Oriented Database Programming Language
Object-oriented data models are receiving wide attention since they provide expressive ionmechanismsto model naturally and directly both structural and behavioral aspectsof comple...
Antonio Albano, Giorgio Ghelli, Renzo Orsini
LPAR
2005
Springer
15 years 10 months ago
A New Constraint Solver for 3D Lattices and Its Application to the Protein Folding Problem
Abstract. The paper describes the formalization and implementation of an efficient constraint programming framework operating on 3D crystal lattices. The framework is motivated an...
Alessandro Dal Palù, Agostino Dovier, Enric...
ECOOP
2003
Springer
15 years 9 months ago
Higher-Order Hierarchies
This paper explains how higher-order hierarchies can be used to handle the expression problem. The expression is concerned with extending both the set of data structures and the s...
Erik Ernst