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» Markov Processes on Curves
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120
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BMCBI
2005
114views more  BMCBI 2005»
15 years 19 days ago
A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins
Background: Structure prediction of membrane proteins is still a challenging computational problem. Hidden Markov models (HMM) have been successfully applied to the problem of pre...
Piero Fariselli, Pier Luigi Martelli, Rita Casadio
PAMI
2010
215views more  PAMI 2010»
14 years 11 months ago
Fusion Moves for Markov Random Field Optimization
—The efficient application of graph cuts to Markov Random Fields (MRFs) with multiple discrete or continuous labels remains an open question. In this paper, we demonstrate one p...
Victor S. Lempitsky, Carsten Rother, Stefan Roth, ...
BMCBI
2010
99views more  BMCBI 2010»
15 years 26 days ago
Prediction of novel precursor miRNAs using a context-sensitive hidden Markov model (CSHMM)
Background: It has been apparent in the last few years that small non coding RNAs (ncRNA) play a very significant role in biological regulation. Among these microRNAs (miRNAs), 22...
Sumeet Agarwal, Candida Vaz, Alok Bhattacharya, As...
88
Voted
ESA
2007
Springer
113views Algorithms» more  ESA 2007»
15 years 7 months ago
Sweeping and Maintaining Two-Dimensional Arrangements on Surfaces: A First Step
We introduce a general framework for processing a set of curves defined on a continuous two-dimensional parametric surface, while sweeping the parameter space. We can handle plan...
Eric Berberich, Efi Fogel, Dan Halperin, Kurt Mehl...
92
Voted
SAC
2010
ACM
15 years 6 months ago
Haptic manipulation of rational parametric planar cubics using shape constraints
In this paper, we show how to deform a planar rational cubic based on a local interpolation constraint while retaining the qualitative shape of the curve. An impedance-type, paral...
Christoph Fünfzig, Philippe Thomin, Gudrun Al...