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CP
2003
Springer
15 years 5 months ago
A SAT-Based Approach to Multiple Sequence Alignment
Multiple sequence alignment is a central problem in Bioinformatics. A known integer programming approach is to apply branch-and-cut to exponentially large graph-theoretic models. T...
Steven David Prestwich, Desmond G. Higgins, Orla O...
102
Voted
RECOMB
2005
Springer
16 years 10 hour ago
Information Theoretic Approaches to Whole Genome Phylogenies
We describe a novel method for efficient reconstruction of phylogenetic trees, based on sequences of whole genomes or proteomes, whose lengths may greatly vary. The core of our me...
David Burstein, Igor Ulitsky, Tamir Tuller, Benny ...
JCB
2006
124views more  JCB 2006»
14 years 11 months ago
The Average Common Substring Approach to Phylogenomic Reconstruction
We describe a novel method for efficient reconstruction of phylogenetic trees, based on sequences of whole genomes or proteomes, whose lengths may greatly vary. The core of our me...
Igor Ulitsky, David Burstein, Tamir Tuller, Benny ...
JMLR
2010
179views more  JMLR 2010»
14 years 6 months ago
PAC-Bayesian Analysis of Co-clustering and Beyond
We derive PAC-Bayesian generalization bounds for supervised and unsupervised learning models based on clustering, such as co-clustering, matrix tri-factorization, graphical models...
Yevgeny Seldin, Naftali Tishby
GLOBECOM
2009
IEEE
15 years 6 months ago
Maximizing Lifetime of Sensor-Target Surveillance in Wireless Sensor Networks
—The paper addresses the maximal lifetime problem in sensor-target surveillance networks. Given a set of sensors and targets in an Euclidean plane, each sensor can watch all targ...
Hai Liu, Xiaowen Chu, Yiu-Wing Leung, Xiaohua Jia,...