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DAGSTUHL
2007
15 years 6 months ago
Matrix Analytic Methods in Branching processes
We examine the question of solving the extinction probability of a particular class of continuous-time multi-type branching processes, named Markovian binary trees (MBT). The exti...
Sophie Hautphenne, Guy Latouche, Marie-Ange Remich...
ISMB
2000
15 years 6 months ago
Accelerating Protein Classification Using Suffix Trees
Position-specific scoring matrices have been used extensively to recognize highly conserved protein regions. We present a method for accelerating these searches using a suffix tre...
Bogdan Dorohonceanu, Craig G. Nevill-Manning
WG
2005
Springer
15 years 10 months ago
Algebraic Operations on PQ Trees and Modular Decomposition Trees
Partitive set families are families of sets that can be quite large, but have a compact, recursive representation in the form of a tree. This tree is a common generalization of PQ...
Ross M. McConnell, Fabien de Montgolfier
129
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IJCV
2007
115views more  IJCV 2007»
15 years 4 months ago
Discovering Shape Classes using Tree Edit-Distance and Pairwise Clustering
This paper describes work aimed at the unsupervised learning of shape-classes from shock trees. We commence by considering how to compute the edit distance between weighted trees. ...
Andrea Torsello, Antonio Robles-Kelly, Edwin R. Ha...
156
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BMCBI
2010
135views more  BMCBI 2010»
15 years 5 months ago
MrsRF: an efficient MapReduce algorithm for analyzing large collections of evolutionary trees
Background: MapReduce is a parallel framework that has been used effectively to design largescale parallel applications for large computing clusters. In this paper, we evaluate th...
Suzanne Matthews, Tiffani L. Williams