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» Measuring Similarity between Sets of Overlapping Clusters
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WWW
2008
ACM
14 years 7 months ago
Statistical properties of community structure in large social and information networks
A large body of work has been devoted to identifying community structure in networks. A community is often though of as a set of nodes that has more connections between its member...
Jure Leskovec, Kevin J. Lang, Anirban Dasgupta, Mi...
BMCBI
2006
117views more  BMCBI 2006»
13 years 6 months ago
SigFlux: A novel network feature to evaluate the importance of proteins in signal transduction networks
Background: Measuring each protein's importance in signaling networks helps to identify the crucial proteins in a cellular process, find the fragile portion of the biology sy...
Wei Liu, Dong Li, Jiyang Zhang, Yunping Zhu, Fuchu...
BMCBI
2007
135views more  BMCBI 2007»
13 years 6 months ago
Automatic extraction of reliable regions from multiple sequence alignments
Background: High quality multiple alignments are crucial in the transfer of annotation from one genome to another. Multiple alignment methods strive to achieve ever increasing lev...
Timo Lassmann, Erik L. L. Sonnhammer
TASLP
2008
201views more  TASLP 2008»
13 years 6 months ago
Syntactically Lexicalized Phrase-Based SMT
Abstract--Until quite recently, extending Phrase-based Statistical Machine Translation (PBSMT) with syntactic knowledge caused system performance to deteriorate. The most recent su...
Hany Hassan, Khalil Sima'an, Andy Way
BMCBI
2004
196views more  BMCBI 2004»
13 years 6 months ago
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...
Robert C. Edgar