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» Mechanisms for Mapping High-Level Parallel Performance Data
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BMCBI
2010
138views more  BMCBI 2010»
15 years 1 months ago
A database and API for variation, dense genotyping and resequencing data
Background: Advances in sequencing and genotyping technologies are leading to the widespread availability of multi-species variation data, dense genotype data and large-scale rese...
Daniel Rios, William M. McLaren, Yuan Chen, Ewan B...
WWW
2011
ACM
14 years 8 months ago
Counting triangles and the curse of the last reducer
The clustering coefficient of a node in a social network is a fundamental measure that quantifies how tightly-knit the community is around the node. Its computation can be reduce...
Siddharth Suri, Sergei Vassilvitskii
BMCBI
2005
147views more  BMCBI 2005»
15 years 1 months ago
Calibration of mass spectrometric peptide mass fingerprint data without specific external or internal calibrants
Background: Peptide Mass Fingerprinting (PMF) is a widely used mass spectrometry (MS) method of analysis of proteins and peptides. It relies on the comparison between experimental...
Witold E. Wolski, Maciej Lalowski, Peter Jungblut,...
SP
2008
IEEE
122views Security Privacy» more  SP 2008»
15 years 1 months ago
Large-scale phylogenetic analysis on current HPC architectures
Abstract. Phylogenetic inference is considered a grand challenge in Bioinformatics due to its immense computational requirements. The increasing popularity and availability of larg...
Michael Ott, Jaroslaw Zola, Srinivas Aluru, Andrew...
CAMP
2005
IEEE
15 years 7 months ago
Real-Time Low Level Feature Extraction for On-Board Robot Vision Systems
Abstract— Robot vision systems notoriously require large computing capabilities, rarely available on physical devices. Robots have limited embedded hardware, and almost all senso...
Roberto Pirrone, Giuseppe Careri, F. Saverio Fabia...