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BMCBI
2010
108views more  BMCBI 2010»
14 years 12 months ago
An intuitionistic approach to scoring DNA sequences against transcription factor binding site motifs
Background: Transcription factors (TFs) control transcription by binding to specific regions of DNA called transcription factor binding sites (TFBSs). The identification of TFBSs ...
Fernando Garcia-Alcalde, Armando Blanco, Adrian J....
CIKM
1997
Springer
15 years 3 months ago
Analysis and Design of Server Informative WWW-Sites
The access patterns of the users of a web-site are traditionally analyzed in order to facilitate the user access to the site's information. In this study, however, a systemat...
Amir M. Zarkesh, Jafar Adibi, Cyrus Shahabi, Reza ...
BMCBI
2007
127views more  BMCBI 2007»
14 years 12 months ago
Characterization of protein-interaction networks in tumors
Background: Analyzing differential-gene-expression data in the context of protein-interaction networks (PINs) yields information on the functional cellular status. PINs can be for...
Alexander Platzer, Paul Perco, Arno Lukas, Bernd M...
BMCBI
2005
122views more  BMCBI 2005»
14 years 11 months ago
A neural strategy for the inference of SH3 domain-peptide interaction specificity
Background: The SH3 domain family is one of the most representative and widely studied cases of so-called Peptide Recognition Modules (PRM). The polyproline II motif PxxP that gen...
Enrico Ferraro, Allegra Via, Gabriele Ausiello, Ma...
COCOA
2011
Springer
13 years 11 months ago
Algorithmic Aspects of Heterogeneous Biological Networks Comparison
Biological networks are commonly used to model molecular activity within the cell. Recent experimental studies have shown that the detection of conserved subnetworks across several...
Guillaume Blin, Guillaume Fertin, Hafedh Mohamed-B...