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IADIS
2008
14 years 11 months ago
Sisa: Seeded Iterative Signature Algorithm for Biclustering Gene Expression Data
One approach to reduce the complexity of the task in the analysis of large scale genome-wide expression is to group the genes showing similar expression patterns into what are cal...
Neelima Gupta, Seema Aggarwal
BMCBI
2010
196views more  BMCBI 2010»
14 years 7 months ago
Content-based microarray search using differential expression profiles
Background: With the expansion of public repositories such as the Gene Expression Omnibus (GEO), we are rapidly cataloging cellular transcriptional responses to diverse experiment...
Jesse M. Engreitz, Alexander A. Morgan, Joel Dudle...
PSB
2003
14 years 11 months ago
Decomposing Gene Expression into Cellular Processes
We propose a probabilistic model for cellular processes, and an algorithm for discovering them from gene expression data. A process is associated with a set of genes that particip...
Eran Segal, Alexis Battle, Daphne Koller
BMCBI
2008
126views more  BMCBI 2008»
14 years 9 months ago
GeneChaser: Identifying all biological and clinical conditions in which genes of interest are differentially expressed
Background: The amount of gene expression data in the public repositories, such as NCBI Gene Expression Omnibus (GEO) has grown exponentially, and provides a gold mine for bioinfo...
Rong Chen, Rohan Mallelwar, Ajit Thosar, Shivkumar...
JBI
2007
138views Bioinformatics» more  JBI 2007»
14 years 9 months ago
Towards knowledge-based gene expression data mining
ct 10 The field of gene expression data analysis has grown in the past few years from being purely data-centric to integrative, aiming at 11 complementing microarray analysis with...
Riccardo Bellazzi, Blaz Zupan