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    BMCBI
    2005
    178views more  BMCBI 2005»
    A quantization method based on threshold optimization for microarray short time series
    14 years 9 months ago
    A quantization method based on threshold optimization for microarray short time series
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    Background: Reconstructing regulatory networks from gene expression profiles is a challenging problem of functional genomics. In microarray studies the number of samples is often ...
    Barbara Di Camillo, Fatima Sanchez-Cabo, Gianna To...
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    BMCBI
    2008
    138views more  BMCBI 2008»
    Systematic identification of yeast cell cycle transcription factors using multiple data sources
    14 years 9 months ago
    Systematic identification of yeast cell cycle transcription factors using multiple data sources
    Download  www.biomedcentral.com
    Background: Eukaryotic cell cycle is a complex process and is precisely regulated at many levels. Many genes specific to the cell cycle are regulated transcriptionally and are exp...
    Wei-Sheng Wu, Wen-Hsiung Li
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    BMCBI
    2006
    119views more  BMCBI 2006»
    Utilization of two sample t-test statistics from redundant probe sets to evaluate different probe set algorithms in GeneChip stu
    14 years 9 months ago
    Utilization of two sample t-test statistics from redundant probe sets to evaluate different probe set algorithms in GeneChip stu
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    Background: The choice of probe set algorithms for expression summary in a GeneChip study has a great impact on subsequent gene expression data analysis. Spiked-in cRNAs with know...
    Zihua Hu, Gail R. Willsky
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    BMCBI
    2007
    106views more  BMCBI 2007»
    Modeling SAGE tag formation and its effects on data interpretation within a Bayesian framework
    14 years 9 months ago
    Modeling SAGE tag formation and its effects on data interpretation within a Bayesian framework
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    Background: Serial Analysis of Gene Expression (SAGE) is a high-throughput method for inferring mRNA expression levels from the experimentally generated sequence based tags. Stand...
    Michael A. Gilchrist, Hong Qin, Russell L. Zaretzk...
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    IJCSA
    2007
    98views more  IJCSA 2007»
    Extracted Knowledge Interpretation in mining biological data: a survey
    14 years 9 months ago
    Extracted Knowledge Interpretation in mining biological data: a survey
    Download  rainbow.polytech.unice.fr
    This paper discusses different approaches for integrating biological knowledge in gene expression analysis. Indeed we are interested in the fifth step of microarray analysis pro...
    Martine Collard, Ricardo Martínez
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