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135
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BMCBI
2005
97views more  BMCBI 2005»
15 years 21 days ago
Phylogenetic reconstruction of ancestral character states for gene expression and mRNA splicing data
Background: As genomes evolve after speciation, gene content, coding sequence, gene expression, and splicing all diverge with time from ancestors with close relatives. A minimum e...
Roald Rossnes, Ingvar Eidhammer, David A. Liberles
131
Voted
BMCBI
2005
155views more  BMCBI 2005»
15 years 21 days ago
Mining protein function from text using term-based support vector machines
Background: Text mining has spurred huge interest in the domain of biology. The goal of the BioCreAtIvE exercise was to evaluate the performance of current text mining systems. We...
Simon B. Rice, Goran Nenadic, Benjamin J. Stapley
PVLDB
2010
112views more  PVLDB 2010»
14 years 11 months ago
Querying Probabilistic Information Extraction
Recently, there has been increasing interest in extending relational query processing to include data obtained from unstructured sources. A common approach is to use stand-alone I...
Daisy Zhe Wang, Michael J. Franklin, Minos N. Garo...
BMCBI
2011
14 years 7 months ago
Predicting functionally important SNP classes based on negative selection
Background: With the advent of cost-effective genotyping technologies, genome-wide association studies allow researchers to examine hundreds of thousands of single nucleotide poly...
Mark A. Levenstien, Robert J. Klein
TIP
2011
217views more  TIP 2011»
14 years 7 months ago
Contextual Object Localization With Multiple Kernel Nearest Neighbor
—Recently, many object localization models have shown that incorporating contextual cues can greatly improve accuracy over using appearance features alone. Therefore, many of the...
Brian McFee, Carolina Galleguillos, Gert R. G. Lan...