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CORR
2010
Springer
185views Education» more  CORR 2010»
15 years 3 months ago
Estimating and Sampling Graphs with Multidimensional Random Walks
Estimating characteristics of large graphs via sampling is a vital part of the study of complex networks. Current sampling methods such as (independent) random vertex and random w...
Bruno F. Ribeiro, Donald F. Towsley
CORR
2008
Springer
116views Education» more  CORR 2008»
15 years 3 months ago
Learning to rank with combinatorial Hodge theory
Abstract. We propose a number of techniques for learning a global ranking from data that may be incomplete and imbalanced -- characteristics that are almost universal to modern dat...
Xiaoye Jiang, Lek-Heng Lim, Yuan Yao, Yinyu Ye
BMCBI
2006
108views more  BMCBI 2006»
15 years 3 months ago
SPIDer: Saccharomyces protein-protein interaction database
Background: Since proteins perform their functions by interacting with one another and with other biomolecules, reconstructing a map of the protein-protein interactions of a cell,...
Xiaomei Wu, Lei Zhu, Jie Guo, Cong Fu, Hongjun Zho...
BMCBI
2006
137views more  BMCBI 2006»
15 years 3 months ago
A maximum likelihood framework for protein design
Background: The aim of protein design is to predict amino-acid sequences compatible with a given target structure. Traditionally envisioned as a purely thermodynamic question, thi...
Claudia L. Kleinman, Nicolas Rodrigue, Céci...
BMCBI
2006
149views more  BMCBI 2006»
15 years 3 months ago
HeatMapper: powerful combined visualization of gene expression profile correlations, genotypes, phenotypes and sample characteri
Background: Accurate interpretation of data obtained by unsupervised analysis of large scale expression profiling studies is currently frequently performed by visually combining s...
Roel G. W. Verhaak, Mathijs A. Sanders, Maarten A....