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BMCBI
2008
163views more  BMCBI 2008»
15 years 3 months ago
Gene Ontology term overlap as a measure of gene functional similarity
Background: The availability of various high-throughput experimental and computational methods allows biologists to rapidly infer functional relationships between genes. It is oft...
Meeta Mistry, Paul Pavlidis
RT
2000
Springer
15 years 6 months ago
Measuring Visual Shape using Computer Graphics Psychophysics
This paper reviews recent psychophysical methods that have been developed for measuring the perceived shape of objects. We discuss two types of shape ambiguities that exist for man...
Michael S. Langer, Heinrich H. Bülthoff
BMCBI
2008
141views more  BMCBI 2008»
15 years 3 months ago
Alternative contingency table measures improve the power and detection of multifactor dimensionality reduction
Background: Multifactor Dimensionality Reduction (MDR) has been introduced previously as a non-parametric statistical method for detecting gene-gene interactions. MDR performs a d...
William S. Bush, Todd L. Edwards, Scott M. Dudek, ...
BMCBI
2007
128views more  BMCBI 2007»
15 years 3 months ago
Combining classifiers to predict gene function in Arabidopsis thaliana using large-scale gene expression measurements
Background: Arabidopsis thaliana is the model species of current plant genomic research with a genome size of 125 Mb and approximately 28,000 genes. The function of half of these ...
Hui Lan, Rachel Carson, Nicholas J. Provart, Antho...
BMCBI
2008
142views more  BMCBI 2008»
15 years 3 months ago
Strategies for measuring evolutionary conservation of RNA secondary structures
Background: Evolutionary conservation of RNA secondary structure is a typical feature of many functional non-coding RNAs. Since almost all of the available methods used for predic...
Andreas R. Gruber, Stephan H. F. Bernhart, Ivo L. ...