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BMCBI
2011
14 years 5 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes
COMPSAC
2002
IEEE
15 years 6 months ago
An Effective Content-Based Visual Image Retrieval System
In this paper, an effective content-based visual image retrieval system is presented. This system consists of two main components: visual content extraction and indexing, and quer...
Xiuqi Li, Shu-Ching Chen, Mei-Ling Shyu, Borko Fur...
119
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HPDC
2006
IEEE
15 years 8 months ago
Exploring I/O Strategies for Parallel Sequence-Search Tools with S3aSim
Parallel sequence-search tools are rising in popularity among computational biologists. With the rapid growth of sequence databases, database segmentation is the trend of the futu...
Avery Ching, Wu-chun Feng, Heshan Lin, Xiaosong Ma...
ATAL
2009
Springer
15 years 3 months ago
Efficient physics-based planning: sampling search via non-deterministic tactics and skills
Motion planning for mobile agents, such as robots, acting in the physical world is a challenging task, which traditionally concerns safe obstacle avoidance. We are interested in p...
Stefan Zickler, Manuela M. Veloso
BMCBI
2008
87views more  BMCBI 2008»
15 years 2 months ago
Protein structure search and local structure characterization
Background: Structural similarities among proteins can provide valuable insight into their functional mechanisms and relationships. As the number of available three-dimensional (3...
Shih-Yen Ku, Yuh-Jyh Hu